Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
ESCA rs7290770 chr22:19861161 C/T 2.73E-5 176 13.03 18.67 3.73 KM Plot
ESCA rs73036792 chr19:44439355 G/C 8.11E-6 178 13.03 15.9 5.92 KM Plot
ESCA rs73160236 chr22:19275606 C/G 3.15E-7 179 13.37 12.83 2.7 KM Plot
ESCA rs73173502 chr8:2415371 A/G 4.67E-9 181 13.1 15.57 2.93 KM Plot
ESCA rs73454716 chr11:44601043 G/A 2.89E-6 181 13.35 16.98 4.27 KM Plot
ESCA rs73478207 chr15:98446463 A/C 5.06E-5 177 13.02 18.42 3.47 KM Plot
ESCA rs73484435 chr8:2457832 T/C 1.84E-9 179 13.22 14.15 2.93 KM Plot
ESCA rs73484447 chr8:2470490 C/G 2.16E-9 178 13.1 15.07 2.93 KM Plot
ESCA rs73581396 chr11:129923963 A/G 9.66E-5 180 13.1 12.2 3.47 KM Plot
ESCA rs73652535 chr9:90920011 T/C 5.56E-5 182 13.37 13.1 3.93 KM Plot
ESCA rs73705442 chr8:120868328 C/G 4.88E-7 181 13 18.6 3.73 KM Plot
ESCA rs7404887 chr16:8706846 C/A 5.0E-5 179 3.2 12.95 13.37 KM Plot
ESCA rs74115307 chr10:743027 C/G 9.03E-5 183 13.1 13.42 4.73 KM Plot
ESCA rs74163317 chr10:126722170 G/C 3.63E-5 183 13.38 10.53 7.87 KM Plot
ESCA rs742409 chr16:1499617 T/C 1.34E-7 183 13.33 14.12 4 KM Plot